The RsolaniDB (RDB) database hosts R. solani reference genomes, transcript and protein sequences in FASTA format, together with genome annotations provided in GFF3 format. Each genome is organized into entries, where every entry contains detailed information about a given transcript and protein, including intron–exon boundaries, predicted functions, associated pathways and GO terms, predicted sequences, orthologs, and functional protein domains identified using InterPro, PrositeProfile, and Pfam.
The assayM COVID-19, is a web application to track the sensitivity of RT-PCR primers published by the World Health Organisation (WHO) on SARS-CoV-2 variants genome datasets along with the free energy variation as an indicator for the RT-PCR amplification efficiency.
plasmoRUtils is an R package for assisting users fetch data from numerous plasmodium and other apicomplexan related databases such as VEuPathDB database and OrthoMCL. In addition, the package offer detailed documentation and functions to streamline mundane bioinformatics tasks.